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The second problem is the technical barrier of accessing the web service: It requires a good amount of work to download all interesting ontologies, for example due to a range of ontologies published in a compressed form or the logistical hurdle of recreating new snapshots over and over again. First, the repository is limited to biomedical ontologies, which makes BioPortal unsuitable for surveys that require access to ontologies of different domains.
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There are, however, certain problems with this option. The currently best option for ontology related research is the BioPortal repository, which provides a web based interface for browsing ontologies in the biomedical domain and a REST web service to programmatically obtain copies of all (public) versions of a wide range of biomedical ontologies. size, e ort), which makes reproducing experiment results often impossible. On top of that, few authors ever publish the datasets they used, often for practical reasons (e.g. Since it is generally difficult to obtain representative datasets, both due to technical reasons (lack of suitable collections) and conceptual reasons (lack of agreement on what they should be representative of), it is common practice to manually select a somewhat arbitrary set of ontologies that usually supports the given case. The Manchester OWLRepository is a collection of OWL and OWL compatible ontologies curated mainly for the purpose of OWL related empirical work such as surveys and benchmarking experiments.Įmpirical work with ontologies comes in a wide variety of forms, for example surveys of the modular structure of ontologies, surveys of modelling patterns to inform design decisions of engineering environments and benchmarking activities for reasoning services such as Description Logic (DL) classification.